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Image Segmentation
PyTorch
pytorch-connectomics
connectomics
electron-microscopy
em
neuron-segmentation
instance-segmentation
3d
affinity
mednext
biology
neuroscience
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tutorial

Commit History

Today

  1. neuron_segneuron: mean VI 0.869 (zero padding, matches training)

    dwei
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    a16b69a

  2. Add neuron_segneuron: BANIS+ trained on EMNeuron (200k steps, EMA); model card⁠

    dwei
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    4b948cf

  1. SNEMI3D: repackage flat with test-labels.h5 for tutorial download

    dwei
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    3d04574

  2. Add SNEMI3D mirror of Zenodo record 7142003 (byte-identical snemi.zip)

    dwei
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    15a679c

  1. Add Lucchi++ tutorial dataset archive

    Donglai Wei
    5239ac0

  1. banis+ seed-42 200k ckpt (NISB baseline, test NERL 0.601 @cc3d 0.66)

    dwei
    Verified signature
    4500e6c

  1. Move mito_lucchi++ MedNeXt-S checkpoint and config into folder

    dwei
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    bb11438

  2. Add resolved config for mito_lucchi++ MedNeXt-S checkpoint

    dwei
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    b00ddcc

  3. Add mito_lucchi++ MedNeXt-S checkpoint (Jaccard 0.935)

    dwei
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    20cb0d7

  4. Delete mito_lucchi++_15k.ckpt

    dwei
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    c9924f2

  1. pretrained model on Lucchi++ dataset for 15K iterations

    dwei
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    5bcca02

  2. initial commit

    dwei
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    515889f