Daily Papers

Recent advances in web-augmented large language models (LLMs) have exhibited strong performance in complex reasoning tasks, yet these capabilities are mostly locked in proprietary systems with opaque architectures. In this work, we propose ManuSearch, a transparent and modular multi-agent framework designed to democratize deep search for LLMs. ManuSearch decomposes the search and reasoning process into three collaborative agents: (1) a solution planning agent that iteratively formulates sub-queries, (2) an Internet search agent that retrieves relevant documents via real-time web search, and (3) a structured webpage reading agent that extracts key evidence from raw web content. To rigorously evaluate deep reasoning abilities, we introduce ORION, a challenging benchmark focused on open-web reasoning over long-tail entities, covering both English and Chinese. Experimental results show that ManuSearch substantially outperforms prior open-source baselines and even surpasses leading closed-source systems. Our work paves the way for reproducible, extensible research in open deep search systems. We release the data and code in https://github.com/RUCAIBox/ManuSearch

Scholarly writing presents a complex space that generally follows a methodical procedure to plan and produce both rationally sound and creative compositions. Recent works involving large language models (LLM) demonstrate considerable success in text generation and revision tasks; however, LLMs still struggle to provide structural and creative feedback on the document level that is crucial to academic writing. In this paper, we introduce a novel taxonomy that categorizes scholarly writing behaviors according to intention, writer actions, and the information types of the written data. We also provide ManuScript, an original dataset annotated with a simplified version of our taxonomy to show writer actions and the intentions behind them. Motivated by cognitive writing theory, our taxonomy for scientific papers includes three levels of categorization in order to trace the general writing flow and identify the distinct writer activities embedded within each higher-level process. ManuScript intends to provide a complete picture of the scholarly writing process by capturing the linearity and non-linearity of writing trajectory, such that writing assistants can provide stronger feedback and suggestions on an end-to-end level. The collected writing trajectories are viewed at https://minnesotanlp.github.io/REWARD_demo/

We present the Manuscripts of Handwritten Arabic~(Muharaf) dataset, which is a machine learning dataset consisting of more than 1,600 historic handwritten page images transcribed by experts in archival Arabic. Each document image is accompanied by spatial polygonal coordinates of its text lines as well as basic page elements. This dataset was compiled to advance the state of the art in handwritten text recognition (HTR), not only for Arabic manuscripts but also for cursive text in general. The Muharaf dataset includes diverse handwriting styles and a wide range of document types, including personal letters, diaries, notes, poems, church records, and legal correspondences. In this paper, we describe the data acquisition pipeline, notable dataset features, and statistics. We also provide a preliminary baseline result achieved by training convolutional neural networks using this data.

This manuscript presents an historical perspective prepared by Barry Ninham and Colin Pask in 1969 on the connection between quantum electrodynamics theory and nucleon interactions. A new theory of strong interactions based on electromagnetic considerations is proposed. Energy and force range magnitudes are correctly given. A new theory of the pion emerges and the pion mass and lifetime are calculated. No strong interaction coupling constant is required.

Ancient manuscripts are the primary source of ancient linguistic corpora. However, many ancient manuscripts exhibit duplications due to unintentional repeated publication or deliberate forgery. The Dead Sea Scrolls, for example, include counterfeit fragments, whereas Oracle Bones (OB) contain both republished materials and fabricated specimens. Identifying ancient manuscript duplicates is of great significance for both archaeological curation and ancient history study. In this work, we design a progressive OB duplicate discovery framework that combines unsupervised low-level keypoints matching with high-level text-centric content-based matching to refine and rank the candidate OB duplicates with semantic awareness and interpretability. We compare our model with state-of-the-art content-based image retrieval and image matching methods, showing that our model yields comparable recall performance and the highest simplified mean reciprocal rank scores for both Top-5 and Top-15 retrieval results, and with significantly accelerated computation efficiency. We have discovered over 60 pairs of new OB duplicates in real-world deployment, which were missed by domain experts for decades. Code, model and real-world results are available at: https://github.com/cszhangLMU/OBD-Finder/.

Historical Arabic manuscript transcription is not only a recognition problem. A usable scholarly system must cope with shifting hands and layouts, preserve uncertain readings, distinguish visual evidence from linguistic plausibility, and record the researcher's final decision. We present Phoenix, a 4.99-million-parameter CNN-BiLSTM-CTC recognizer, and Athar, an evidence-aware review workflow built around it. Phoenix is adapted across archival, Maghrebi, and historical manuscript domains using document-aware replay, an expanded 81-symbol codec, and forgetting guards that reject checkpoints that improve a new domain at unacceptable cost to previous domains. In a pre-specified held-out comparison against the preceding checkpoint, frozen before evaluation and scored with greedy decoding and raw references, Phoenix reduced CER from 22.12% to 17.86% on 10,594 Agapet lines and from 17.72% to 11.84% on 11,684 Omar lines, while regressing from 10.39% to 10.72% on 164 TariMa lines. Across the two large held-out sets, character-weighted CER fell from 19.98% to 14.93%, a 25.3% relative error reduction. A separate same-protocol development diagnostic found the lowest CER for Phoenix on four of four comparable domains (9.59% unweighted macro CER). An N-best diagnostic revealed a 2.15-point oracle gap between beam decoding and Oracle@25, while neural text rerankers, consensus MBR, CTC-posterior quality estimation, and local pre-CTC hidden-state quality estimation recovered less than 4% of this gap. Athar therefore preserves the visual reading, exposes bounded alternatives, uses local language models conservatively, retrieves source parallels with unique, ambiguous, or abstain states, and exports auditable TEI and PAGE-XML records. The results support evaluating manuscript HTR as auditable evidence management rather than silent text replacement.

Scientific figure assessment in peer review differs fundamentally from general image quality evaluation: a figure must be visually legible, faithfully support the manuscript's claims, and communicate evidence with a clear visual hierarchy. However, if we apply traditional image assessment methods to scientific figure quality assessment, limitations emerge: classic IQA models capture perceptual quality or aesthetics but cannot judge whether a figure serves the paper's scientific argument; CLIP-based methods assess generic image-text correspondence, yet lack understanding of manuscript context; and zero-shot LLM/VLM judges, when repurposed for figure scoring, often yield overly concentrated scores with limited fusion of visual and textual evidence. We introduce an annotated dataset of 3,857 scientific figures from peer-reviewed conference papers, each rated along four peer-review-oriented dimensions: Clarity, Relevance, Informativeness, and Structure. We propose SciFigAlign, a fine-tuned multimodal scorer that grounds figure quality assessment in manuscript evidence. Given a figure crop, caption, citing paragraphs, and light paper context, SciFigAlign fine-tunes CLIP and SciBERT end-to-end with per-modality cross-attention and CubeMLP fusion, jointly optimizing SmoothL1 regression with a within-paper ranking hinge loss. Under paper-level splits, SciFigAlign achieves a macro MAE of 0.3524 and a within-paper pairwise accuracy of 81.64% on the test set with n = 396, a 59% relative error reduction over the best LLM-as-judge baseline with MAE 0.864. Ablations confirm that manuscript-grounded inputs, citing-context denoising, and ranking supervision are all critical, showing that scientific figure assessment requires learned alignment between visual content and manuscript evidence rather than prompting alone, even with state-of-the-art VLMs.

Scientific images are the core elements of presenting experimental conclusions, elaborating system architecture, and supporting comparative arguments in scientific papers. However, existing image quality assessment (IQA) methods are predominantly designed for natural photographs or AI-generated content, which cannot be directly applied to scientific papers. The few existing studies on scholarly charts remain confined to visual-surface comparisons, failing to verify caption alignment, citation relevance, or visual misleadingness. To address this, we propose SciFigQual-Bench, a full-text contextual benchmark that evaluates scientific images across five dimensions (clarity, layout, caption fit, context relevance, and misleading risk). The data covers top computer-science conferences from 2020 to 2025; 6,308 images were independently scored by multiple domain experts in five dimensions and aggregated into gold-standard annotations. Unlike previous scientific figure benchmarks, our dataset binds each image to its caption, citing sentence, and manuscript context. To enable automated evaluation on this benchmark, we designed a staged cross-modal evaluation framework SFQ-Agent to achieve auditable and refined scoring through the collection and fusion of modal evidence. Multiple mainstream large models were evaluated on the test subset eval1200, and SFQ-Agent (F3) equipped with GPT-5.6-Sol achieved the lowest overall average absolute error (0.418) and the highest consistency rate (93.4%), consistently outperforming both direct evaluation and auxiliary (Sidecar) visual language model evaluation schemes.

Document Layout Analysis, which is the task of identifying different semantic regions inside of a document page, is a subject of great interest for both computer scientists and humanities scholars as it represents a fundamental step towards further analysis tasks for the former and a powerful tool to improve and facilitate the study of the documents for the latter. However, many of the works currently present in the literature, especially when it comes to the available datasets, fail to meet the needs of both worlds and, in particular, tend to lean towards the needs and common practices of the computer science side, leading to resources that are not representative of the humanities real needs. For this reason, the present paper introduces U-DIADS-Bib, a novel, pixel-precise, non-overlapping and noiseless document layout analysis dataset developed in close collaboration between specialists in the fields of computer vision and humanities. Furthermore, we propose a novel, computer-aided, segmentation pipeline in order to alleviate the burden represented by the time-consuming process of manual annotation, necessary for the generation of the ground truth segmentation maps. Finally, we present a standardized few-shot version of the dataset (U-DIADS-BibFS), with the aim of encouraging the development of models and solutions able to address this task with as few samples as possible, which would allow for more effective use in a real-world scenario, where collecting a large number of segmentations is not always feasible.

Recent LLM-based agents have closed substantial portions of the scientific discovery loop in software-only machine-learning research, in chemistry, and in biology. Extending the same loop to high-fidelity physical simulators is harder, because solver completion does not imply physical validity and many failure modes appear only in field-level imagery rather than in solver logs. We present AI CFD Scientist, an open-source AI scientist for computational fluid dynamics (CFD) that, to our knowledge, is the first to span literature-grounded ideation, validated execution, vision-based physics verification, source-code modification, and figure-grounded writing within a single inspectable workflow. Three coupled pathways cover parameter sweeps within a fixed solver, case-local C++ library compilation for new physical models, and open-ended hypothesis search against a reference comparator, all running on OpenFOAM through Foam-Agent. At the center of the framework is a vision-language physics-verification gate that inspects rendered flow fields before any result is accepted, rerun, or written into a manuscript. On five tasks under a shared GPT-5.5 backbone, AI CFD Scientist autonomously discovers a Spalart-Allmaras runtime correction that reduces lower-wall Cf RMSE against DNS by 7.89% on the periodic hill at Reh=5600; under matched LLM cost, two strong general AI-scientist baselines (ARIS, DeepScientist) execute partial CFD workflows but lack the domain-specific validity gates needed to convert runs into defensible scientific claims; and a controlled planted-failure ablation shows that the vision-language gate detects 14 of 16 silent failures missed by solver-level checks. Code, prompts, and run artifacts are released at https://github.com/csml-rpi/cfd-scientist.

Argument mining and stance detection are central to understanding how opinions are formed and contested in online discourse. However, most publicly available resources focus on mainstream platforms such as Twitter and Reddit, leaving conversational structure on alt-tech platforms comparatively under-studied. We introduce TruthStance, a large-scale dataset of Truth Social conversation threads spanning 2023-2025, consisting of 24,378 posts and 523,360 comments with reply-tree structure preserved. We provide a human-annotated benchmark of 1,500 instances across argument mining and claim-based stance detection, including inter-annotator agreement, and use it to evaluate large language model (LLM) prompting strategies. Using the best-performing configuration, we release additional LLM-generated labels for 24,352 posts (argument presence) and 107,873 comments (stance to parent), enabling analysis of stance and argumentation patterns across depth, topics, and users. All code and data are released publicly.

Machine Learning Interatomic Potentials (MLIP) are a novel in silico approach for molecular property prediction, creating an alternative to disrupt the accuracy/speed trade-off of empirical force fields and density functional theory (DFT). In this white paper, we present our MLIP library which was created with two core aims: (1) provide to industry experts without machine learning background a user-friendly and computationally efficient set of tools to experiment with MLIP models, (2) provide machine learning developers a framework to develop novel approaches fully integrated with molecular dynamics tools. The library includes in this release three model architectures (MACE, NequIP, and ViSNet), and two molecular dynamics (MD) wrappers (ASE, and JAX-MD), along with a set of pre-trained organics models. The seamless integration with JAX-MD, in particular, facilitates highly efficient MD simulations, bringing MLIP models significantly closer to industrial application. The library is available on GitHub and on PyPI under the Apache license 2.0.

Recently, diffusion models have made remarkable progress in text-to-image (T2I) generation, synthesizing images with high fidelity and diverse contents. Despite this advancement, latent space smoothness within diffusion models remains largely unexplored. Smooth latent spaces ensure that a perturbation on an input latent corresponds to a steady change in the output image. This property proves beneficial in downstream tasks, including image interpolation, inversion, and editing. In this work, we expose the non-smoothness of diffusion latent spaces by observing noticeable visual fluctuations resulting from minor latent variations. To tackle this issue, we propose Smooth Diffusion, a new category of diffusion models that can be simultaneously high-performing and smooth. Specifically, we introduce Step-wise Variation Regularization to enforce the proportion between the variations of an arbitrary input latent and that of the output image is a constant at any diffusion training step. In addition, we devise an interpolation standard deviation (ISTD) metric to effectively assess the latent space smoothness of a diffusion model. Extensive quantitative and qualitative experiments demonstrate that Smooth Diffusion stands out as a more desirable solution not only in T2I generation but also across various downstream tasks. Smooth Diffusion is implemented as a plug-and-play Smooth-LoRA to work with various community models. Code is available at https://github.com/SHI-Labs/Smooth-Diffusion.