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Oct 19

Type-Safe Is Not Error-Free: A Constrained Decision Head Follows the Option Name, Not the Rubric Bound to It

Typed decision models are built for settings where model outputs are consumed directly by software. Instead of generating free-form text, they return a decision over a predefined set of options. By construction, every output conforms to the required schema. Yet this guarantee does not tell us whether the model interprets the options as intended. We study Jev and two Jev-like models with open weights by changing how option names are assigned to rubrics. Each option consists of an option name and a textual rubric that defines what the option means. We change only which option name is assigned to each rubric; the question, state, rubric wording, and set of option names remain exactly the same. On 1200 workflow decisions with task-specific rubrics, renaming the two options from 0/1 to no/yes changes 70.4 more answers per hundred (95% CI: [67.6, 73.1]) and shifts AUC from .94 to .23, revealing a systematic reversal in the decision ranking rather than simple uncertainty. The same operation has little effect with neutral option names. This pattern holds across all 4 predicates, where the effect is at least 7.4x larger than under the neutral control, and becomes stronger as the number of options increases. The effect also depends on the read-out geometry: a second model family that mean-pools over the full option span flips 4.1x less often. The hosted model exhibits the same behavior: the swap changes AUC from .8146 to .5806 and produces 24x as many answer flips as its test-retest floor. In contrast, replacing the option names with random character strings returns all model families to the neutral-control regime without reducing accuracy. The failure therefore depends on the semantic polarity of the option names rather than on the renaming operation itself. Across all conditions, the type-error rate remains 0%, even when decision accuracy degrades substantially.

  • 4 authors
·
Sep 22

NeuroProlog: Multi-Task Fine-Tuning for Neurosymbolic Mathematical Reasoning via the Cocktail Effect

Large Language Models (LLMs) achieve strong performance on natural language tasks but remain unreliable in mathematical reasoning, frequently generating fluent yet logically inconsistent solutions. We present NeuroProlog, a neurosymbolic framework that ensures verifiable reasoning by compiling math word problems into executable Prolog programs with formal verification guarantees. We propose a multi-task Cocktail training strategy that jointly optimizes three synergistic objectives in a unified symbolic representation space: (i) mathematical formula-to-rule translation (KB), (ii) natural language-to-program synthesis (SOLVE), and (iii) program-answer alignment. This joint supervision enables positive transfer, where symbolic grounding in formula translation directly improves compositional reasoning capabilities. At inference, we introduce an execution-guided decoding pipeline with fine-grained error taxonomy that enables iterative program repair and quantifies model self-debugging capacity. Comprehensive evaluation on GSM8K across four model scales (3B--32B parameters) demonstrates consistent improvements: cocktail training achieves significant accuracy gains of +5.23\% (Qwen-32B, p < 0.01), +3.43\% (GPT-OSS-20B, p < 0.01), and +5.54\% (Llama-3B, p < 0.05) over single-task baselines. Systematic error analysis reveals scale-dependent learning dynamics: at 32B scale, cocktail training transforms unfixable type errors (12\% repair rate) into correctable domain errors (96\% repair rate), achieving 92.7\% overall correction; at 8B scale, the same training eliminates syntactic errors but introduces semantic failures, revealing a critical capacity threshold for type-safe symbolic reasoning.

  • 2 authors
·
Mar 2

Toxicity Assessment in Preclinical Histopathology via Class-Aware Mahalanobis Distance for Known and Novel Anomalies

Drug-induced toxicity is a leading cause of preclinical and early-clinical failure, making early detection critical. Histopathology is the gold standard for toxicity assessment but relies on expert pathologists, creating a bottleneck for large-scale screening. We introduce an AI-based anomaly detection framework for whole-slide images (WSIs) of rodent liver that identifies healthy tissue and known pathologies (anomalies) and flags samples without training data as out-of-distribution (OOD). We evaluate OOD detection on two held-out categories: apoptosis (single-cell, near-OOD) and staining/processing artifacts (heterogeneous, far-OOD). We build a novel pixelwise-annotated dataset and fine-tune a pre-trained Vision Transformer (DINOv2) via Low-Rank Adaptation (LoRA) for segmentation, then use the Mahalanobis distance for OOD detection with class-specific thresholds. Optimizing the false positive rate subject to a predefined constraint on the false negative rate yields only 0.16% of pathological tissue classified as healthy and 0.35% of healthy tissue classified as pathological. Our false negative rate does not penalise cross-type errors, reflecting the safety-first objective of never overlooking a lesion; under the stricter correct-class criterion our method assigns 93.93% of ID and 89.38% of OOD findings to their own class. The study demonstrates technical feasibility of pixel-level anomaly detection for mouse liver histopathology, indicating possible applications in improving preclinical workflows and drug development efficiency.

  • 6 authors
·
Jun 29

How Many Tries Does It Take? Iterative Self-Repair in LLM Code Generation Across Model Scales and Benchmarks

Large language models frequently fail to produce correct code on their first attempt, yet most benchmarks evaluate them in a single-shot setting. We investigate iterative self-repair (feeding execution errors back to the model for correction) across seven models spanning three families and both open-weight and proprietary providers: Llama 3.1 8B, Llama 3.3 70B, Llama 4 Scout (MoE, 16 experts), Llama 4 Maverick (MoE, 128 experts), Qwen3 32B, Gemini 2.5 Flash, and Gemini 2.5 Pro. On HumanEval (164 problems) and MBPP Sanitized (257 problems) with up to five attempts, self-repair universally improves pass rates: +4.9 to +17.1 pp on HumanEval and +16.0 to +30.0 pp on MBPP. Gemini 2.5 Flash achieves the highest final pass rates (96.3% HumanEval, 93.8% MBPP). Most gains concentrate in the first two rounds.Error-type analysis shows assertion errors (logical mistakes) are the hardest to repair at ~45%, while syntax and name errors are repaired at substantially higher rates, connecting to broader findings on the limits of LLM self-correction. Prior work found that weaker models fail at self-repair or require fine-tuning; we show that modern instruction-tuned models succeed with prompting alone, even at 8B scale. We also provide the first comparison of dense and MoE architectures for self-repair, and extend the repair-vs-resampling tradeoff analysis to modern models. A prompt ablation reveals chain-of-thought repair yields up to +5.5 pp additional self-repair gain (measured as improvement in repair delta) over minimal prompting for capable models.

  • 1 authors
·
Apr 11

The Character Error Vector: Decomposable errors for page-level OCR evaluation

The Character Error Rate (CER) is a key metric for evaluating the quality of Optical Character Recognition (OCR). However, this metric assumes that text has been perfectly parsed, which is often not the case. Under page-parsing errors, CER becomes undefined, limiting its use as a metric and making evaluating page-level OCR challenging, particularly when using data that do not share a labelling schema. We introduce the Character Error Vector (CEV), a bag-of-characters evaluator for OCR. The CEV can be decomposed into parsing and OCR, and interaction error components. This decomposability allows practitioners to focus on the part of the Document Understanding pipeline that will have the greatest impact on overall text extraction quality. The CEV can be implemented using a variety of methods, of which we demonstrate SpACER (Spatially Aware Character Error Rate) and a Character distribution method using the Jensen-Shannon Distance. We validate the CEV's performance against other metrics: first, the relationship with CER; then, parse quality; and finally, as a direct measure of page-level OCR quality. The validation process shows that the CEV is a valuable bridge between parsing metrics and local metrics like CER. We analyse a dataset of archival newspapers made of degraded images with complex layouts and find that state-of-the-art end-to-end models are outperformed by more traditional pipeline approaches. Whilst the CEV requires character-level positioning for optimal triage, thresholding on easily available values can predict the main error source with an F1 of 0.91. We provide the CEV as part of a Python library to support Document understanding research.

  • 3 authors
·
Apr 6

Meta-Tool: Efficient Few-Shot Tool Adaptation for Small Language Models

Can small language models achieve strong tool-use performance without complex adaptation mechanisms? This paper investigates this question through Meta-Tool, a controlled empirical study comparing hypernetwork-based LoRA adaptation against carefully designed few-shot prompting. Using a Llama-3.2-3B-Instruct backbone, we evaluate four adaptation mechanisms--few-shot prompting, documentation encoding, hypernetwork-generated LoRA weights, and value-guided beam search--across four diverse benchmarks: Gorilla APIBench, Spider 2.0, WebArena, and InterCode. Our central finding is a well-supported negative result: despite generating non-trivial weight matrices, the 227.8M-parameter hypernetwork provides no measurable improvement over few-shot prompting alone. Comprehensive ablation studies reveal that few-shot examples contribute +21.5% to performance and documentation contributes +5.0%, while the hypernetwork adds 0%. A 3B model with well-designed prompts achieves 79.7% of GPT-5's average performance at 10 times lower latency. Error analysis across 722 failure cases spanning all shot counts (0--5) shows that at the 5-shot configuration (106 failures), failure modes are task-dependent: schema-heavy tasks (Spider 2.0, WebArena) show near-zero format errors with remaining failures semantic, while format errors dominate on Gorilla (100%) and InterCode (70%). These findings redirect practitioners toward prompt engineering and example curation rather than complex adaptation architectures.

  • 1 authors
·
Apr 21

Beyond Per-Token Pricing: A Concurrency-Aware Methodology for LLM Infrastructure Cost Estimation

Every public LLM cost calculator we surveyed treats GPU utilization as a fixed input -- entered by the user, baked in as a preset, or silently assumed at 100% -- never measured against the operator's actual load. We show that this assumption is the dominant source of error: on identical H100 hardware, effective cost spans \0.21 to 15.25 per million output tokens, an underutilization penalty of 2.5-24x across low-to-moderate enterprise loads (1-10 rps) and up to 36.3x near idle -- driven by one operator-controlled variable, offered request rate lambda, which sets in-flight concurrency via Little's Law and which no open-source calculator exposes. Because calculators take utilization as a user-supplied input, any utilization-naive estimate understates true cost by exactly 1/U, systematically mispricing self-hosting -- most severely over-selling it for low-traffic workloads. We propose a measurement methodology that parameterizes the relationship as C_eff = f(H, M, Q, lambda, L), validate it with 42 benchmarks across dense, ultra-sparse MoE, and sparse MoE models, and release vllm-cost-meter, an open-source cost meter that attaches to a live vLLM server and reports real \$/M-tokens against the operator's own traffic. We further show that FP8 quantization benefits the MoE architectures we tested roughly 2.2-2.4x more than the dense model (+69 to +74% vs. +31% peak throughput; n=3, broader validation needed), and our data are consistent with active parameter count, not total model size, being a primary predictor of saturation economics. To rule out single-hardware confounding we repeat the core sweep on A100 80GB PCIe (56 runs): the load-driven spread reproduces at 7.0-11.4x, the active-parameters ordering survives at FP8, and the dense-FP8 advantage inverts on silicon without native FP8 tensor cores -- a hardware-conditional caveat the framework already accommodates.

  • 1 authors
·
Jun 9

Wieszcz-XIX: A 3.1-Billion-Word Corpus of Pre-1918 Polish and Temporally Bounded Language Models Trained From Scratch

Historical Polish is well documented as a language but annotated in machine-readable form only to about a million words for the period this paper covers; the rest sits behind optical character recognition of variable quality. We present Wieszcz-XIX, a corpus of 6.75 billion tokens (about 3.1 billion words) in 294,369 documents, most of them periodical issues, of Polish published from 1800 to 1918, assembled from Wolne Lektury and the Internet Archive by a pipeline that filters, deduplicates, audits for post-1918 leakage and splits at the document level. It is over three orders of magnitude larger than the annotated corpus of the same period, and we quantify its defects: recognition corruption against a false-positive floor, near-identical duplication, which is removed, and post-1918 leakage, which is excluded from the training corpus itself down to a known residue of 0.04 to 0.38% of its bytes, found in the transcribed source, so the published corpus is the trained one document for document. On a hand-corrected sample the character error rate is 0.68% where the text is legible, and 45% of the sampled passages cannot be corrected. On it we train a ladder of decoder-only models from 47M to 349M parameters from scratch, and measure their temporal boundedness. Against two modern Polish base models, one far larger, the 349M shows a crossover, as does the 107M against the comparator of its size: post-1918 vocabulary costs them about 3.1 bits per byte more than period vocabulary, a gap the comparators do not show, and period vocabulary costs them fewer bits than it costs the comparators. Shown period text, the models keep its spelling and the comparators only partly. Adding parameters gains about twice as much as a second pass over the data. We release the corpus, code and weights. Content warning: the models reproduce period prejudice, including antisemitic statements.

  • 1 authors
·
Oct 5

Can Large Multimodal Models Actively Recognize Faulty Inputs? A Systematic Evaluation Framework of Their Input Scrutiny Ability

Large Multimodal Models (LMMs) have witnessed remarkable growth, showcasing formidable capabilities in handling intricate multimodal tasks with exceptional performance. Recent research has underscored the inclination of large language models to passively accept defective inputs, often resulting in futile reasoning on invalid prompts. However, the same critical question of whether LMMs can actively detect and scrutinize erroneous inputs still remains unexplored. To address this gap, we introduce the Input Scrutiny Ability Evaluation Framework (ISEval), which encompasses seven categories of flawed premises and three evaluation metrics. Our extensive evaluation of ten advanced LMMs has identified key findings. Most models struggle to actively detect flawed textual premises without guidance, which reflects a strong reliance on explicit prompts for premise error identification. Error type affects performance: models excel at identifying logical fallacies but struggle with surface-level linguistic errors and certain conditional flaws. Modality trust varies-Gemini 2.5 pro and Claude Sonnet 4 balance visual and textual info, while aya-vision-8b over-rely on text in conflicts. These insights underscore the urgent need to enhance LMMs' proactive verification of input validity and shed novel insights into mitigating the problem. The code is available at https://github.com/MLGroupJLU/LMM_ISEval.

  • 5 authors
·
Aug 5, 2025 2

Neyman-Pearson (NP) classification algorithms and NP receiver operating characteristics (NP-ROC)

In many binary classification applications such as disease diagnosis and spam detection, practitioners often face great needs to control type I errors (i.e., the conditional probability of misclassifying a class 0 observation as class 1) so that it remains below a desired threshold. To address this need, the Neyman-Pearson (NP) classification paradigm is a natural choice; it minimizes type II error (i.e., the conditional probability of misclassifying a class 1 observation as class 0) while enforcing an upper bound, α, on the type I error. Although the NP paradigm has a century-long history in hypothesis testing, it has not been well recognized and implemented in classification schemes. Common practices that directly limit the empirical type I error to no more than α do not satisfy the type I error control objective because the resulting classifiers are still likely to have type I errors much larger than α. As a result, the NP paradigm has not been properly implemented for many classification scenarios in practice. In this work, we develop the first umbrella algorithm that implements the NP paradigm for all scoring-type classification methods, including popular methods such as logistic regression, support vector machines and random forests. Powered by this umbrella algorithm, we propose a novel graphical tool for NP classification methods: NP receiver operating characteristic (NP-ROC) bands, motivated by the popular receiver operating characteristic (ROC) curves. NP-ROC bands will help choose α in a data adaptive way and compare different NP classifiers. We demonstrate the use and properties of the NP umbrella algorithm and NP-ROC bands, available in the R package nproc, through simulation and real data case studies.

  • 3 authors
·
Sep 26, 2017

Comparative Analysis of Multilingual Pre-trained Models for Nepali Automatic Speech Recognition

Multilingual pretrained models nominally support Nepali, yet no controlled benchmark has compared them under a single fine-tuning protocol. We fine-tune six pretrained models (XLSR-53, IndicWav2Vec, MMS-1B, Whisper-Medium, Whisper-Large-v3-Turbo, and Conformer-Hi) spanning CTC self-supervised, autoregressive encoder-decoder, and hybrid Conformer-CTC architectures, on the OpenSLR SLR54 Nepali corpus (~165 hours) using identical preprocessing, splits, optimizer, and family-matched learning-rate schedules. We evaluate Word Error Rate (WER), Character Error Rate (CER), and Real-Time Factor (RTF) on three independent test sets (OpenSLR, FLEURS, Common Voice). Whisper-Large-v3-Turbo (14.76% WER) and IndicWav2Vec (14.89% WER) tie at the top despite a 9x parameter gap and 40x pretraining-data gap, providing direct empirical evidence that language-family proximity in pretraining can substitute for raw scale for in-domain Nepali. CTC decoders run up to 29x faster than autoregressive Whisper at the same accuracy, flipping the practical deployment preference toward CTC under any latency budget. Massively multilingual pretraining (MMS-1B) yields the smallest out-of-domain degradation on FLEURS (+12.55 pp), indicating that scale buys robustness rather than peak in-domain accuracy. The resulting benchmark provides the first standardized, multi-model, efficiency-aware reference numbers for Nepali ASR.

  • 2 authors
·
May 30

Benchmarking Akan ASR Models Across Domain-Specific Datasets: A Comparative Evaluation of Performance, Scalability, and Adaptability

Most existing automatic speech recognition (ASR) research evaluate models using in-domain datasets. However, they seldom evaluate how they generalize across diverse speech contexts. This study addresses this gap by benchmarking seven Akan ASR models built on transformer architectures, such as Whisper and Wav2Vec2, using four Akan speech corpora to determine their performance. These datasets encompass various domains, including culturally relevant image descriptions, informal conversations, biblical scripture readings, and spontaneous financial dialogues. A comparison of the word error rate and character error rate highlighted domain dependency, with models performing optimally only within their training domains while showing marked accuracy degradation in mismatched scenarios. This study also identified distinct error behaviors between the Whisper and Wav2Vec2 architectures. Whereas fine-tuned Whisper Akan models led to more fluent but potentially misleading transcription errors, Wav2Vec2 produced more obvious yet less interpretable outputs when encountering unfamiliar inputs. This trade-off between readability and transparency in ASR errors should be considered when selecting architectures for low-resource language (LRL) applications. These findings highlight the need for targeted domain adaptation techniques, adaptive routing strategies, and multilingual training frameworks for Akan and other LRLs.

  • 8 authors
·
Jul 2, 2025

ErrorMap and ErrorAtlas: Charting the Failure Landscape of Large Language Models

Large Language Models (LLM) benchmarks tell us when models fail, but not why they fail. A wrong answer on a reasoning dataset may stem from formatting issues, calculation errors, or dataset noise rather than weak reasoning. Without disentangling such causes, benchmarks remain incomplete and cannot reliably guide model improvement. We introduce ErrorMap, the first method to chart the sources of LLM failure. It extracts a model's unique "failure signature", clarifies what benchmarks measure, and broadens error identification to reduce blind spots. This helps developers debug models, aligns benchmark goals with outcomes, and supports informed model selection. ErrorMap works on any model or dataset with the same logic. Applying our method to 35 datasets and 83 models we generate ErrorAtlas, a taxonomy of model errors, revealing recurring failure patterns. ErrorAtlas highlights error types that are currently underexplored in LLM research, such as omissions of required details in the output and question misinterpretation. By shifting focus from where models succeed to why they fail, ErrorMap and ErrorAtlas enable advanced evaluation - one that exposes hidden weaknesses and directs progress. Unlike success, typically measured by task-level metrics, our approach introduces a deeper evaluation layer that can be applied globally across models and tasks, offering richer insights into model behavior and limitations. We make the taxonomy and code publicly available with plans to periodically update ErrorAtlas as new benchmarks and models emerge.

  • 5 authors
·
Feb 16

Instruct-Tuning Pretrained Causal Language Models for Ancient Greek Papyrology and Epigraphy

This article presents an experiment in fine-tuning a pretrained causal language model (Meta's Llama 3.1 8B Instruct) for aiding in three fundamental tasks of philological research: chronological and geographic attribution as well as text restoration in ancient Greek inscriptions and documentary papyri. Using a prompt-based instruct approach, the fine-tuned models surpass the state of the art in key metrics. For inscriptions, the models achieve a lower average character error rate (CER) of 22.5% (vs. 26.3%), while closely matching top-1 accuracy (60.9% vs. 61.8%) and top-20 accuracy (77.5% vs. 78.3%) for sequences up to 10 characters. They also provide a practical advantage by ignoring spaces during reconstruction, aligning better with the scriptio continua typically used in ancient written artifacts. In geographic attribution, the model outperforms previous benchmarks with a top-1 accuracy of 75.0% (vs. 70.8%) and a top-3 accuracy of 83.7% (vs. 82.1%). For dating, it achieves an average deviation of 26.2 years (vs. 29.3) and a median deviation of 1 year (vs. 3) from the actual date range. The models also set new baselines for documentary papyri, with a CER of 16.3%, a top-1 accuracy of 71.3%, and top-20 of 85.0% in text reconstruction; a top-1 accuracy of 66.4% and top-3 of 79.9% in geographic attribution; and, in chronological attribution, a deviation of 21.7 years from the actual termini post/ante quem, with a median deviation of 0 years.

  • 1 authors
·
Sep 20, 2024

LLM4DS: Evaluating Large Language Models for Data Science Code Generation

The adoption of Large Language Models (LLMs) for code generation in data science offers substantial potential for enhancing tasks such as data manipulation, statistical analysis, and visualization. However, the effectiveness of these models in the data science domain remains underexplored. This paper presents a controlled experiment that empirically assesses the performance of four leading LLM-based AI assistants-Microsoft Copilot (GPT-4 Turbo), ChatGPT (o1-preview), Claude (3.5 Sonnet), and Perplexity Labs (Llama-3.1-70b-instruct)-on a diverse set of data science coding challenges sourced from the Stratacratch platform. Using the Goal-Question-Metric (GQM) approach, we evaluated each model's effectiveness across task types (Analytical, Algorithm, Visualization) and varying difficulty levels. Our findings reveal that all models exceeded a 50% baseline success rate, confirming their capability beyond random chance. Notably, only ChatGPT and Claude achieved success rates significantly above a 60% baseline, though none of the models reached a 70% threshold, indicating limitations in higher standards. ChatGPT demonstrated consistent performance across varying difficulty levels, while Claude's success rate fluctuated with task complexity. Hypothesis testing indicates that task type does not significantly impact success rate overall. For analytical tasks, efficiency analysis shows no significant differences in execution times, though ChatGPT tended to be slower and less predictable despite high success rates. This study provides a structured, empirical evaluation of LLMs in data science, delivering insights that support informed model selection tailored to specific task demands. Our findings establish a framework for future AI assessments, emphasizing the value of rigorous evaluation beyond basic accuracy measures.

  • 4 authors
·
Nov 16, 2024

Learning Type Inference for Enhanced Dataflow Analysis

Statically analyzing dynamically-typed code is a challenging endeavor, as even seemingly trivial tasks such as determining the targets of procedure calls are non-trivial without knowing the types of objects at compile time. Addressing this challenge, gradual typing is increasingly added to dynamically-typed languages, a prominent example being TypeScript that introduces static typing to JavaScript. Gradual typing improves the developer's ability to verify program behavior, contributing to robust, secure and debuggable programs. In practice, however, users only sparsely annotate types directly. At the same time, conventional type inference faces performance-related challenges as program size grows. Statistical techniques based on machine learning offer faster inference, but although recent approaches demonstrate overall improved accuracy, they still perform significantly worse on user-defined types than on the most common built-in types. Limiting their real-world usefulness even more, they rarely integrate with user-facing applications. We propose CodeTIDAL5, a Transformer-based model trained to reliably predict type annotations. For effective result retrieval and re-integration, we extract usage slices from a program's code property graph. Comparing our approach against recent neural type inference systems, our model outperforms the current state-of-the-art by 7.85% on the ManyTypes4TypeScript benchmark, achieving 71.27% accuracy overall. Furthermore, we present JoernTI, an integration of our approach into Joern, an open source static analysis tool, and demonstrate that the analysis benefits from the additional type information. As our model allows for fast inference times even on commodity CPUs, making our system available through Joern leads to high accessibility and facilitates security research.

  • 6 authors
·
Oct 1, 2023 1

Position: Early-Stage Quality Assurance in Annotation Pipelines Is More Cost-Effective Than Late-Stage Validation

This position paper argues that the machine learning community should prioritize early-stage quality assurance in annotation pipelines over the prevailing practice of late-stage validation. Data quality bottlenecks increasingly limit foundation model improvement, yet quality assurance research focuses almost exclusively on validation methods rather than validation timing. When validation occurs, not merely what methods are employed, fundamentally determines both error rates and annotation costs. This temporal neglect is puzzling given the well-established "shift-left" principle from software engineering, where empirical studies demonstrate 4--100x cost multipliers for defects detected in later stages (Boehm, 1981; Shull et al., 2002). Annotation pipelines exhibit analogous dynamics: errors caught before annotation begins cost a fraction of those discovered after review cycles complete. We propose a taxonomy of three QA trigger points, namely pre-annotation (T0), post-annotation (T1), and post-review (T2), that decompose annotation workflows into discrete validation opportunities. A parametric error-propagation model formalizes when timing affects final error rates versus only economics, making timing a measurable design variable rather than a configuration afterthought. A survey of 47 recent papers reveals that only 4% report when validation occurs, a striking gap given timing's demonstrated impact in adjacent fields. Without explicit attention to QA timing, the community risks optimizing validation methods while ignoring the structural variable that may matter most. Acting on this position requires three steps: researchers should report QA timing configurations alongside validation methods; annotation platforms should expose timing as a first-class parameter; and the community should run controlled experiments that measure stage-specific detection rates directly.

PyMETA: Evaluating Student Code Diagnosis on and Beyond the First Execution Error

Large language models can diagnose a student program from its code, problem statement, and reference solution. Evaluating this ability requires a clear definition of what counts as the correct diagnosis. We introduce PyMETA, a Python error dataset with 48,646 student submissions to 155 problems. Every submission has a single label for the first execution error identified by an Online Judge, or No Error when the program passes all tests. A targeted subset of 97 submissions also has expert labels collected through iterative repair and re-execution. The taxonomy has three levels; its most detailed level contains 14 labels, including No Error, Logic Error, named Python exceptions, and an Other Errors category. We evaluate two finetuned models and two groups of prompted LLMs: four earlier models and four recent models. When evaluated against the first execution error, the recent prompted models reach 87.5--93.8% macro F1, above the strongest finetuned baseline at 80.6%. This is the opposite of the comparison obtained with the earlier prompted models. On the 97-item expert subset, however, exact-set match is only 43.3--48.5%, although sample F1 is about 79--81%. Output format also matters. On the same 45 audited submissions whose expert label sets do not contain Logic Error, none of the four recent models returns that label under single-error prompting, but 46.7--57.8% of their multi-error outputs include it, usually after an explicit-error label. The results show that model rankings and claims about label bias depend on the meaning of the gold label, the number of labels a model may return, and the scoring rule.

  • 6 authors
·
Sep 14

Correcting diacritics and typos with a ByT5 transformer model

Due to the fast pace of life and online communications and the prevalence of English and the QWERTY keyboard, people tend to forgo using diacritics, make typographical errors (typos) when typing in other languages. Restoring diacritics and correcting spelling is important for proper language use and the disambiguation of texts for both humans and downstream algorithms. However, both of these problems are typically addressed separately: the state-of-the-art diacritics restoration methods do not tolerate other typos, but classical spellcheckers also cannot deal adequately with all the diacritics missing. In this work, we tackle both problems at once by employing the newly-developed universal ByT5 byte-level seq2seq transformer model that requires no language-specific model structures. For a comparison, we perform diacritics restoration on benchmark datasets of 12 languages, with the addition of Lithuanian. The experimental investigation proves that our approach is able to achieve results (> 98%) comparable to the previous state-of-the-art, despite being trained less and on fewer data. Our approach is also able to restore diacritics in words not seen during training with > 76% accuracy. Our simultaneous diacritics restoration and typos correction approach reaches > 94% alpha-word accuracy on the 13 languages. It has no direct competitors and strongly outperforms classical spell-checking or dictionary-based approaches. We also demonstrate all the accuracies to further improve with more training. Taken together, this shows the great real-world application potential of our suggested methods to more data, languages, and error classes.

  • 5 authors
·
Jan 31, 2022

pico-type: A 1.5M-Parameter Byte-Level Multi-Head Content Classifier

We introduce pico-type, a byte-level multi-head content classifier with approximately 1.5 million parameters that simultaneously predicts seven content properties from raw UTF-8 bytes in a single forward pass. Operating directly at the byte level -- no tokenizer, no subword vocabulary, no pretrained embeddings -- pico-type classifies coarse type (12 classes), modality (8), subtype (24), code language (62), text language (30), file MIME type (90), and risk flags (6-label multi-label: API keys, JWTs, passwords, emails, phone numbers, SSH keys). The architecture combines a learned byte embedding, three convolutional blocks with growing receptive fields, two bidirectional attention layers with rotary position encodings, and a statistical pooling layer feeding seven Matryoshka-style classification heads. Four tiered variants (tiny/small/base/pro) share the same trunk with sliced representations from 16 to 576 dimensions, yielding ONNX exports under 210 KB and CPU inference under 10 ms. Trained on a mixture of synthetic templates and real-world data (8709 GitHub code samples, 5000 Wikipedia articles), pico-type achieves 60.3 percent code language accuracy on The Heap benchmark (24 languages) and 98.2 percent text language accuracy on Wikipedia (30 languages) -- improvements of +57 and +79 percentage points respectively over the synthetic-only baseline. Format-based heads (coarse, modality, subtype, file_mime, risk) maintain 100 percent accuracy on synthetic benchmarks. The model, code, and pretrained weights are released under Apache 2.0.

eulogik Eulogik
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Jul 30

LEMMA: Learning from Errors for MatheMatical Advancement in LLMs

Large language models (LLMs) have demonstrated remarkable reasoning capability in solving mathematical problems. However, existing approaches primarily focus on improving the quality of correct training data, e.g., distilling high-quality correct solutions from advanced models, neglecting the value contained in error data, potentially hindering the model's reflective ability. Though some studies attempt to leverage error data, they often involve complex mechanisms, such as Monte Carlo Tree Search (MCTS) to explore error nodes. In this work, we propose to enhance LLMs' reasoning ability by Learning from Errors for Mathematical Advancement (LEMMA). LEMMA constructs data consisting of an incorrect solution with an erroneous step and a reflection connection to a correct solution for fine-tuning. Specifically, we systematically analyze the model-generated error types and introduce an error-type grounded mistake augmentation method to collect diverse and representative errors. Correct solutions are either from fixing the errors or generating a fresh start. Through a model-aware smooth reflection connection, the erroneous solution is transferred to the correct one. By fine-tuning on the constructed dataset, the model is able to self-correct errors autonomously within the generation process without relying on external critique models. Experimental results demonstrate that LEMMA achieves significant performance improvements over other strong baselines.

  • 10 authors
·
Mar 21, 2025 2

Tracing LLM Reasoning Processes with Strategic Games: A Framework for Planning, Revision, and Resource-Constrained Decision Making

Large language models (LLMs) are increasingly used for tasks that require complex reasoning. Most benchmarks focus on final outcomes but overlook the intermediate reasoning steps - such as planning, revision, and decision making under resource constraints. We argue that measuring these internal processes is essential for understanding model behavior and improving reliability. We propose using strategic games as a natural evaluation environment: closed, rule-based systems with clear states, limited resources, and automatic feedback. We introduce a framework that evaluates LLMs along three core dimensions: planning, revision, and resource-constrained decision making. To operationalize this, we define metrics beyond win rate, including overcorrection risk rate, correction success rate, improvement slope, and over-budget ratio. In 4320 adversarial rounds across 12 leading models, ChatGPT-o3-mini achieves the top composite score, with a win rate of 74.7 percent, a correction success rate of 78.6 percent, and an improvement slope of 0.041. By contrast, Qwen-Plus, despite an overcorrection risk rate of 81.6 percent, wins only 25.6 percent of its matches - primarily due to excessive resource use. We also observe a negative correlation between overcorrection risk rate and correction success rate (Pearson r = -0.51, p = 0.093), suggesting that more frequent edits do not always improve outcomes. Our findings highlight the value of assessing not only what LLMs decide but how they arrive at those decisions

  • 8 authors
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Jun 13, 2025

VoiceCodeBench: Evaluating Exact Structured-Token Recovery in Automatic Speech Recognition

Automatic speech recognition (ASR) systems are commonly evaluated with word error rate (WER), yet many voice workflows depend on exact written values for identifiers, paths, and measured quantities. A transcript can appear fluent and achieve low WER while corrupting a value that a downstream system must parse, store, or execute. We introduce VoiceCodeBench, a benchmark for evaluating exact structured-token recovery in English ASR. It contains 300 human-recorded workplace segments spanning eight workflow domains and 1,482 audited target entities across 26 entity types, each with a canonical written form recoverable from the audio. Under a raw-audio-only protocol, systems receive audio bytes without additional context or metadata. Alongside WER, we evaluate Canonical Token/Entity Match (CTEM), Task Success Rate (TSR), and per-type exact recovery. Across 12 baseline ASR systems, lower WER generally corresponded to better structured-token recovery but did not fully determine it: Spearman correlations were -0.73 for both WER versus CTEM and WER versus TSR. The strongest baseline by TSR reached only 68.7%, leaving nearly one third of recordings with at least one unrecovered workflow-critical value. These results show that entity-sensitive metrics are needed to assess whether ASR output preserves exact values that production systems must parse, route, store, compare, or execute.

  • 7 authors
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Aug 27

Agent Mesh: Reliability Primitives for Non-Idempotent Agent Delegation - Identity Adequacy and Evidence Adequacy

Autonomous agents increasingly perform bounded software tasks under an orchestrator that retries, resumes, and budgets them. The machinery such orchestrators reach for is the service mesh's: retry, timeout, and error-rate circuit breaking. We report a failure study of a production agentic software-delivery platform over 147 numbered incidents spanning 81 runs, each with a measured cost and, in most cases, a mutation proof reproducing the failure. All three assumptions those primitives rest on are violated in practice, and we quantify the consequences: a loop of fifty-four consecutive successful tool calls no error-rate breaker could see; a progress signal constant by construction, guaranteeing a false trip on the third repair round and driving one run from six of six components to three; twenty-one events accumulated across six invocations of one delegation, making a correct, idempotent component unwinnable; a misrouted failure that woke five components for a two-component fault, leaving three bystanders regressing working code; and twelve incidents in which the enforcement layer blocked correct work, the most expensive costing 107 agent turns and zero accepted writes. We find one cross-cutting cause and its dual. Identity adequacy: in five separate subsystems an identity that failed to discriminate produced a confident wrong answer, and two of them derived the corrective rule independently. Evidence adequacy: a reliability decision may be taken only on evidence capable of moving, attributable to what it measures, and deterministic under identical conditions. From the findings we derive seven reliability primitives whose enforcement unit is the delegation rather than the message, and specify the controlled evaluation the study motivates but does not constitute.

  • 3 authors
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Aug 25

Labels Override Definitions in Jev-Style Typed Decision Models

A typed decision model answers a fixed question about an input by returning a probability for each of several caller-defined options. Each option carries a short label and a written definition, which is where a developer states the rule the model should apply. Jev introduced this interface for routing, moderation and triage, open implementations followed, and the same operation occurs whenever a language model is used as a classifier by scoring label strings. We study the open implementations, whose weights we can inspect and patch, and ask whether the probability follows the definitions or the labels. A preference for the label we call option-label bias. Across four open-weight typed decision models, three ways of reading an answer from a Qwen2.5 backbone, eleven classification tasks and PolicyBench, a synthetic routing suite we introduce in which the rule appears only in the definitions, the answer is mostly the labels. Deleting every definition leaves accuracy unchanged (laya-td: 0.8559 against 0.8487), although those definitions support 0.7971 on their own, and renaming the options to A and B raises accuracy by +0.1511 [+0.1377, +0.1646]. One system, von, is unaffected, and the two code bases differ in one expression: laya writes each option as "{label}: {definition}", while von writes only the definition. Changing that expression in both directions, with no weight changed, makes all three laya checkpoints exactly invariant (+0.0000 [+0.0000, +0.0000]) and creates the effect in von, whose accuracy falls from 0.8511 to 0.2281 when a label contradicts its definition. Earlier work attributed this failure to the constrained decision head these models use in place of a text decoder; our results locate it in the prompt rendering. We give a two-call test that tells a practitioner which case applies to their model, and measure what four mitigations are worth.

When Correct Isn't Usable: Improving Structured Output Reliability in Small Language Models

Deployed language models must produce outputs that are both correct and format-compliant. We study this structured-output reliability gap using two mathematical benchmarks -- GSM8K and MATH -- as a controlled testbed: ground truth is unambiguous and the output contract is strict (JSON with required fields). We evaluate three 7-9B models under five prompting strategies and report output accuracy -- the joint event of mathematical correctness and valid JSON structure -- as the primary metric. A systematic format failure emerges: NAIVE prompting (no system prompt) achieves up to 85% task accuracy on GSM8K but 0% output accuracy across all models and datasets. REFERENCE prompting (a minimal hand-written JSON format prompt) fares little better, yielding 0% output accuracy for two of four models tested. Constrained decoding enforces syntactic validity but incurs 3.6x-8.2x latency overhead and in several settings degrades task performance substantially. To overcome this limitation, we developed AloLab, an iterative system-prompt optimizer (meta-agent: Claude Sonnet 4.5) requiring only black-box API access to the target model; it reaches 84-87% output accuracy on GSM8K and 34-40% on MATH across five independent runs per model, with 29/30 paired McNemar comparisons against the best static prompt significant at p < 0.05, at near-NAIVE inference latency and without model fine-tuning. The same format failure extends to GPT-4o (OpenAI, 2024), a proprietary closed-source model: REFERENCE achieves 0% output accuracy due to systematic markdown-fence wrapping, while AloLab reaches 95.2% [94.8, 95.6]. An ablation replacing the Sonnet 4.5 meta-agent with Claude 3 Haiku reduces mean output accuracy to 61.0% and increases run-to-run standard deviation from <1 pp to 21.8 pp, confirming that meta-agent capability is a primary driver of optimization quality.

  • 4 authors
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May 3

When Does q-error Predict Plan Regret? Three Regimes of Cardinality-Estimation Error

Cardinality-estimation (CE) research ranks estimators by q-error, yet it is well known that q-error is an imperfect proxy for query-plan quality. We give a measurement-driven account of when it is a good proxy and when it is not, and why. Modeling plan selection as an argmin over a piecewise-linear cost landscape, we find that plan regret (the cost of the chosen plan relative to the optimal, under true cardinalities) is governed by plan-cost geometry in a regime-dependent way. (i) For small errors, a true-point condition number kappa predicts regret and out-predicts q-error; its predictive power decays to zero as error grows, as a local linearization must. (ii) For large errors -- where deployed learned estimators operate -- an estimator-independent average-case sub-optimality measure ACS-infinity predicts which queries are regret-prone (Spearman rho ~ 0.54 on STATS-CEB), while q-error is nearly uninformative at the query level (rho ~ 0.05). (iii) The worst case is Haritsa's maximum sub-optimality (MSO). The three are one cost-ratio spectrum under three weightings. We prove a limit law ACS-infinity = sum_k r_k pi_k with cardinality-independent combinatorial weights, and validate every claim on STATS-CEB and JOB-light with four released estimators under pre-registered decision rules, and confirm on real PostgreSQL runtime that ACS-infinity predicts regret where q-error does not. The contribution is conceptual and empirical -- an average-case companion to worst-case robust query optimization, and a characterization of when an accuracy metric tracks plan quality -- rather than a new estimator. Code and the full pre-registration are public.

  • 2 authors
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Jun 13

When Does Combining Language Models Help? A Co-Failure Ceiling on Routing, Voting, and Mixture-of-Agents Across 67 Frontier Models

Multi-model LLM systems such as routing, voting, cascades, fusion, and mixture-of-agents are used to beat single-model accuracy. We show that their gain is capped by a quantity the field rarely reports. For any policy whose output is one member model answer, accuracy cannot exceed one minus beta, where beta is the rate at which every model is wrong on the same query. In contrast, the usual diagnostic, average pairwise error correlation rho, cannot identify beta: error laws with identical marginals and pairwise correlations can have different all-wrong rates. A Clopper-Pearson bound on beta gives a finite-sample certificate on the largest gain any router, vote, or cascade could deliver before training a router. Across 67 models from 21 providers, a tetrachoric-calibrated single-factor model still underprices the all-wrong tail: on open-ended mathematics, observed beta is 0.052 versus 0.023 under the full 67-model Gaussian copula, about 2.5 times underpricing, with 90 percent CI 1.7 to 3.4 and k equals 17. The effect recurs on execution-graded code, where beta is 0.079. Re-asking the same GPQA-Diamond questions in free-response rather than multiple-choice form reopens the tail, with beta 0.127 and a five-judge panel with kappa 0.73 to 0.92, locating co-failure in answer format rather than subject. At matched quality, low-rho heterogeneous ensembles beat high-rho Self-MoA, but on checkable tasks in our pool, combining models rarely beats the single best model without a strong query-level routing signal. Gains come from models failing on different questions, not from adding more models.

Kaikaku Kaikaku
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Jun 24 3

The Devil in the Details: Emergent Misalignment, Format and Coherence in Open-Weights LLMs

Prior work has shown that fine-tuning models on a narrow domain with misaligned data can lead to broad misalignment - a phenomenon termed "emergent misalignment" (Betley et al. 2025). While all tested models were susceptible to emergent misalignment, some models showed more resistance than others. Specifically the Qwen-2.5 family proved to be relatively resistant, while GPT-4o exhibited the strongest misalignment. In this paper we evaluate if current-generation open-weights models exhibit similar resistance to the Qwen-2.5 family and measure misalignment robustness over a range of model architectures and scales. We replicate the effect across nine modern open-weights models (Gemma 3 and Qwen 3 families, 1B-32B parameters). Models fine-tuned on insecure code generation show a 0.68% misalignment rate (compared to 0.07% for base models), matching the lower end of prior open-model results but dramatically lower than GPT-4o's 20%. We identify a critical format-dependent vulnerability: requiring JSON output doubles misalignment rates compared to natural language prompts (0.96% vs 0.42%). This suggests that structural constraints may bypass safety training by reducing the model's 'degrees of freedom' to refuse. These findings confirm emergent misalignment as a reproducible phenomenon in modern open-weights models, with rates substantially lower than observed in proprietary systems.

  • 1 authors
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Nov 25, 2025

Beyond Calibration: Do a Typed-Decision Model's Probabilities Obey the Probability Axioms?

Typed-decision models such as TypeSafe's Jev answer a declared yes/no or multiple-choice question about a state with a probability instead of text, and their evaluations report accuracy and calibration. Neither requires that the probabilities a model gives to logically related questions fit together item by item, which is what a system that acts on those probabilities needs. We test this property, coherence, with a battery of logically linked questions that needs no labels. For 160 items from ChaosNLI and PubMedQA, each with three mutually exclusive labels, we ask whether the label is X, whether it is not X, whether it is one of the other two labels, and which label applies. On 480 negation pairs, Jev's probabilities for "the label is X" and "the label is not X" miss summing to one by 0.064 on average (95% CI 0.055 to 0.072). Qwen3.8-27B, run from its official BF16 weights, misses by 0.293 with first-token probabilities and by 0.122 with verbalized probabilities. The gap to the first-token readout persists on pairs where both systems give similar probabilities, without double-negation labels, and after averaging Jev's repeated calls. Jev is not coherent either: its violations are about five times its repeat noise, and it over-endorses statements about single labels, so that its three single-label probabilities sum to 1.14 on average. The two systems also fail differently. Qwen3.8-27B's first-token readout under-endorses the complement of a label whether or not the question contains "not", rejecting both a statement and its negation in 196 of 480 pairs, and it does not become more coherent where it is more confident, whereas Jev's violations concentrate where its answer is uncertain. Because the checks need no labels, they expose biases that appear only when question forms are compared, and inconsistencies within items.

  • 3 authors
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Sep 26

Exploring Multimodal Large Language Models for Radiology Report Error-checking

This paper proposes one of the first clinical applications of multimodal large language models (LLMs) as an assistant for radiologists to check errors in their reports. We created an evaluation dataset from two real-world radiology datasets (MIMIC-CXR and IU-Xray), with 1,000 subsampled reports each. A subset of original reports was modified to contain synthetic errors by introducing various type of mistakes. The evaluation contained two difficulty levels: SIMPLE for binary error-checking and COMPLEX for identifying error types. LLaVA (Large Language and Visual Assistant) variant models, including our instruction-tuned model, were used for the evaluation. Additionally, a domain expert evaluation was conducted on a small test set. At the SIMPLE level, the LLaVA v1.5 model outperformed other publicly available models. Instruction tuning significantly enhanced performance by 47.4% and 25.4% on MIMIC-CXR and IU-Xray data, respectively. The model also surpassed the domain experts accuracy in the MIMIC-CXR dataset by 1.67%. Notably, among the subsets (N=21) of the test set where a clinician did not achieve the correct conclusion, the LLaVA ensemble mode correctly identified 71.4% of these cases. This study marks a promising step toward utilizing multi-modal LLMs to enhance diagnostic accuracy in radiology. The ensemble model demonstrated comparable performance to clinicians, even capturing errors overlooked by humans. Nevertheless, future work is needed to improve the model ability to identify the types of inconsistency.

  • 10 authors
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Dec 20, 2023

The Edinburgh International Accents of English Corpus: Towards the Democratization of English ASR

English is the most widely spoken language in the world, used daily by millions of people as a first or second language in many different contexts. As a result, there are many varieties of English. Although the great many advances in English automatic speech recognition (ASR) over the past decades, results are usually reported based on test datasets which fail to represent the diversity of English as spoken today around the globe. We present the first release of The Edinburgh International Accents of English Corpus (EdAcc). This dataset attempts to better represent the wide diversity of English, encompassing almost 40 hours of dyadic video call conversations between friends. Unlike other datasets, EdAcc includes a wide range of first and second-language varieties of English and a linguistic background profile of each speaker. Results on latest public, and commercial models show that EdAcc highlights shortcomings of current English ASR models. The best performing model, trained on 680 thousand hours of transcribed data, obtains an average of 19.7% word error rate (WER) -- in contrast to the 2.7% WER obtained when evaluated on US English clean read speech. Across all models, we observe a drop in performance on Indian, Jamaican, and Nigerian English speakers. Recordings, linguistic backgrounds, data statement, and evaluation scripts are released on our website (https://groups.inf.ed.ac.uk/edacc/) under CC-BY-SA license.

  • 6 authors
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Mar 31, 2023

Evaluating Large Language Models for Code Review

Context: Code reviews are crucial for software quality. Recent AI advances have allowed large language models (LLMs) to review and fix code; now, there are tools that perform these reviews. However, their reliability and accuracy have not yet been systematically evaluated. Objective: This study compares different LLMs' performance in detecting code correctness and suggesting improvements. Method: We tested GPT4o and Gemini 2.0 Flash on 492 AI generated code blocks of varying correctness, along with 164 canonical code blocks from the HumanEval benchmark. To simulate the code review task objectively, we expected LLMs to assess code correctness and improve the code if needed. We ran experiments with different configurations and reported on the results. Results: With problem descriptions, GPT4o and Gemini 2.0 Flash correctly classified code correctness 68.50% and 63.89% of the time, respectively, and corrected the code 67.83% and 54.26% of the time for the 492 code blocks of varying correctness. Without problem descriptions, performance declined. The results for the 164 canonical code blocks differed, suggesting that performance depends on the type of code. Conclusion: LLM code reviews can help suggest improvements and assess correctness, but there is a risk of faulty outputs. We propose a process that involves humans, called the "Human in the loop LLM Code Review" to promote knowledge sharing while mitigating the risk of faulty outputs.

  • 4 authors
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May 26, 2025

Error Classification of Large Language Models on Math Word Problems: A Dynamically Adaptive Framework

Large Language Models (LLMs) have demonstrated remarkable capabilities across various domains. Math Word Problems (MWPs) serve as a crucial benchmark for evaluating LLMs' reasoning abilities. While most research primarily focuses on improving accuracy, it often neglects understanding and addressing the underlying patterns of errors. Current error classification methods rely on static and predefined categories, which limit their ability to capture the full spectrum of error patterns in mathematical reasoning. To enable systematic error analysis, we collect error samples from 15 different LLMs of varying sizes across four distinct MWP datasets using multiple sampling strategies. Based on this extensive collection, we introduce MWPES-300K, a comprehensive dataset containing 304,865 error samples that cover diverse error patterns and reasoning paths. To reduce human bias and enable fine-grained analysis of error patterns, we propose a novel framework for automated dynamic error classification in mathematical reasoning. Experimental results demonstrate that dataset characteristics significantly shape error patterns, which evolve from basic to complex manifestations as model capabilities increase. With deeper insights into error patterns, we propose error-aware prompting that incorporates common error patterns as explicit guidance, leading to significant improvements in mathematical reasoning performance.

  • 5 authors
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Jan 26, 2025

Will It Survive? Deciphering the Fate of AI-Generated Code in Open Source

The integration of AI agents as coding assistants into software development has raised questions about the long-term viability of AI agent-generated code. A prevailing hypothesis within the software engineering community suggests this code is "disposable", meaning it is merged quickly but discarded shortly thereafter. If true, organizations risk shifting maintenance burden from generation to post-deployment remediation. We investigate this hypothesis through survival analysis of 201 open-source projects, tracking over 200,000 code units authored by AI agents versus humans. Contrary to the disposable code narrative, agent-authored code survives significantly longer: at the line level, it exhibits a 15.8 percentage-point lower modification rate and 16% lower hazard of modification (HR = 0.842, p < 0.001). However, modification profiles differ. Agent-authored code shows modestly elevated corrective rates (26.3% vs. 23.0%), while human code shows higher adaptive rates. However, the effect sizes are small (Cramér's V = 0.116), and per-agent variation exceeds the agent-human gap. Turning to prediction, textual features can identify modification-prone code (AUC-ROC = 0.671), but predicting when modifications occur remains challenging (Macro F1 = 0.285), suggesting timing depends on external organizational dynamics. The bottleneck for agent-generated code may not be generation quality, but the organizational practices that govern its long-term evolution.

  • 2 authors
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Jan 23

Pervasive Label Errors in Test Sets Destabilize Machine Learning Benchmarks

We identify label errors in the test sets of 10 of the most commonly-used computer vision, natural language, and audio datasets, and subsequently study the potential for these label errors to affect benchmark results. Errors in test sets are numerous and widespread: we estimate an average of at least 3.3% errors across the 10 datasets, where for example label errors comprise at least 6% of the ImageNet validation set. Putative label errors are identified using confident learning algorithms and then human-validated via crowdsourcing (51% of the algorithmically-flagged candidates are indeed erroneously labeled, on average across the datasets). Traditionally, machine learning practitioners choose which model to deploy based on test accuracy - our findings advise caution here, proposing that judging models over correctly labeled test sets may be more useful, especially for noisy real-world datasets. Surprisingly, we find that lower capacity models may be practically more useful than higher capacity models in real-world datasets with high proportions of erroneously labeled data. For example, on ImageNet with corrected labels: ResNet-18 outperforms ResNet-50 if the prevalence of originally mislabeled test examples increases by just 6%. On CIFAR-10 with corrected labels: VGG-11 outperforms VGG-19 if the prevalence of originally mislabeled test examples increases by just 5%. Test set errors across the 10 datasets can be viewed at https://labelerrors.com and all label errors can be reproduced by https://github.com/cleanlab/label-errors.

  • 3 authors
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Mar 26, 2021

Do System One Decisions Add Up? A Study of Probabilistic Coherence

A decision model can give probabilities that sum to one for every question yet disagree with itself when the same decision is broken into smaller steps. We study this form of probabilistic coherence in Jev and the English Laya checkpoint, using 2,500 matched examples per system across TREC, CLINC150, and MASSIVE. Across 72,000 classification questions, we compare direct fine-label predictions with broad-category probabilities and predictions reconstructed through those categories. Both systems show substantial disagreement: mean category-level total variation ranges from 0.219 to 0.349 for Jev and from 0.424 to 0.689 for Laya, on a scale where zero means exact agreement. The consequences differ sharply. On CLINC150, reconstruction reduces Jev's accuracy by 22.9 percentage points (paired 95% bootstrap interval: [-24.9, -20.9]) and improves Laya's by 21.3 points ([18.0, 24.5]). The same directions hold across all three datasets, with all six unadjusted accuracy-change intervals excluding zero. Improved accuracy can also accompany less reliable confidence: on MASSIVE, Laya gains 9.2 accuracy points while its expected calibration error rises from 0.046 to 0.124. Error analysis identifies both broad-category mistakes and within-category confusions. These findings show why decision systems need joint evaluation of accuracy, confidence calibration, and probability coherence in the workflow used by an application.

  • 1 authors
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Sep 26

Scientific Agents: Evaluating Profession-Specific System Prompts on Scientific Tasks

Detailed profession-specific system prompts raise token use and estimated cost per response without a consistent accuracy gain. We evaluate Scientific Agents, an open-source corpus of 503 profession-specific AGENTS.md profiles, with Gemini 3.8 Flash via OpenRouter in the Pi agent harness. We compare matched profiles with four controls: a minimal baseline ("You are a helpful assistant"), the profile's opening role sentence, a generic scientific rigor guide, and a profile from an unrelated domain. Across nine text-based science benchmarks (4,531 sampled questions, 100 matched profiles), 4,488 items completed all five conditions after API-error retries, scored with automated, rule-based grading. The average profile-baseline accuracy difference is -0.6 percentage points (95% bootstrap interval [-1.5, +0.2] across fixed tasks), and no benchmark shows a statistically clear improvement. Matched profiles produced 1.5-2.3 times as many output tokens and cost 2.2-4.5 times more per successful call. On 60 tool-using BioMysteryBench bioinformatics problems (three runs each for baseline and profile), mean solve rates were 46.7% with the profile and 56.7% at baseline, a difference of -10.0 percentage points (95% interval [-16.7, -3.3]) driven by more frequent token- and time-limit stops under the profile. Longer prompts had one unexpected operational advantage: on SuperGPQA, frequent provider API drops left the short baseline with a correct first-pass answer on only 54.0% of items, against 71.6% with the profile. Generic and mismatched prompts were about as reliable, so this gain comes from prompt length or formatting rather than domain expertise. For the tested model and tasks, loading full profession profiles by default does not improve accuracy and costs considerably more; whether selective retrieval of profile sections or open-ended scientific tasks would change this remains to be tested.

  • 1 authors
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Sep 6

An Empirical Study of Flaky Tests in Python

Tests that cause spurious failures without any code changes, i.e., flaky tests, hamper regression testing, increase maintenance costs, may shadow real bugs, and decrease trust in tests. While the prevalence and importance of flakiness is well established, prior research focused on Java projects, thus raising the question of how the findings generalize. In order to provide a better understanding of the role of flakiness in software development beyond Java, we empirically study the prevalence, causes, and degree of flakiness within software written in Python, one of the currently most popular programming languages. For this, we sampled 22352 open source projects from the popular PyPI package index, and analyzed their 876186 test cases for flakiness. Our investigation suggests that flakiness is equally prevalent in Python as it is in Java. The reasons, however, are different: Order dependency is a much more dominant problem in Python, causing 59% of the 7571 flaky tests in our dataset. Another 28% were caused by test infrastructure problems, which represent a previously undocumented cause of flakiness. The remaining 13% can mostly be attributed to the use of network and randomness APIs by the projects, which is indicative of the type of software commonly written in Python. Our data also suggests that finding flaky tests requires more runs than are often done in the literature: A 95% confidence that a passing test case is not flaky on average would require 170 reruns.

  • 4 authors
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Jan 22, 2021

T5Gemma-TTS Technical Report

Autoregressive neural codec language models have shown strong zero-shot voice cloning ability, but decoder-only architectures treat input text as a prefix that competes with the growing audio sequence for positional capacity, weakening text conditioning over long utterances. We present T5Gemma-TTS, an encoder-decoder codec language model that maintains persistent text conditioning by routing bidirectional text representations through cross-attention at every decoder layer. Built on the T5Gemma pretrained encoder-decoder backbone (2B encoder + 2B decoder; 4B parameters), it inherits rich linguistic knowledge without phoneme conversion and processes text directly at the subword level. To improve duration control, we introduce Progress-Monitoring Rotary Position Embedding (PM-RoPE) in all 26 cross-attention layers, injecting normalized progress signals that help the decoder track target speech length. Trained on 170,000 hours of multilingual speech in English, Chinese, and Japanese, T5Gemma-TTS achieves a statistically significant speaker-similarity gain on Japanese over XTTSv2 (0.677 vs. 0.622; non-overlapping 95% confidence intervals) and the highest numerical Korean speaker similarity (0.747) despite Korean not being included in training, although this margin over XTTSv2 (0.741) is not statistically conclusive. It also attains the lowest numerical Japanese character error rate among five baselines (0.126), though this ranking should be interpreted cautiously because of partial confidence-interval overlap with Kokoro. English results on LibriSpeech should be viewed as an upper-bound estimate because LibriHeavy is a superset of LibriSpeech. Using the same checkpoint, disabling PM-RoPE at inference causes near-complete synthesis failure: CER degrades from 0.129 to 0.982 and duration accuracy drops from 79% to 46%. Code and weights are available at https://github.com/Aratako/T5Gemma-TTS.

  • 2 authors
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Apr 1 2

OCRR: A Benchmark for Online Correction Recovery under Distribution Shift

Static benchmarks measure a model frozen at training time. Real systems face distribution shift: new categories, paraphrased queries, drift: and must recover online via user corrections. No existing benchmark measures recovery speed under correction streams. We introduce OCRR (Online Correction Recovery Rate): a benchmark that streams a corpus through a classification system, applies oracle or stochastic corrections to wrong predictions, and reports two curves: novel-class accuracy and original-distribution accuracy versus correction count. We evaluate the substrate alongside nine baseline algorithms from five families plus seven bounded-storage variants of the substrate for the Pareto sweep, including standard online-learning baselines (river), continual-learning methods (EWC, A-GEM, LwF), retrieval/parametric hybrids (kNN-LM), parameter-efficient fine-tuning of a 1.5 B-parameter encoder (LoRA on DeBERTa-v3-large), and a hash-chained append-only substrate (Substrate). On Banking77 and CLINC150, under oracle and sparse correction policies, the substrate is the only system that simultaneously recovers novel-class accuracy (88.7 +/- 2.9 %) and retains original-distribution accuracy (95.4 +/- 0.8 %) beating the next-best published continual-learning baseline by 32.6 percentage points at equal memory budget, and beating LoRA-on-DeBERTa-v3-large by 84.6 percentage points on retention. We further find that classification accuracy remains stable at 99 % even as approximate-nearest-neighbour recall@5 degrades from 0.69 to 0.23 across 10 k to 10 M corpus scales, suggesting the substrate's margin-band majority vote is robust to retrieval imperfection in a way that pure top-k recall metrics do not predict. Code and data are available at https://github.com/adriangrassi/ocrr-benchmark.

  • 1 authors
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May 3

Test Coverage Analysis of Agentic Pull Requests

AI coding agents increasingly submit complete pull requests (PRs) with minimal human intervention, shifting software development from AI-assisted to autonomous workflows. As these agents become more prevalent, ensuring the code they generate is adequately tested, by existing tests or by tests the agents write, is critical to preventing regressions, yet little is known about testing in agentic PRs. To address this gap, we analyze 4882 agent-generated PRs from the AIDev dataset (532 Java and 4350 Python PRs) produced by five coding agents. We study (i) how often agents include test changes and (ii) how well covered are code changes by existing and agent-written tests. Agents include test changes in only 49.6% of PRs that change code under test files. Existing tests provide an incomplete safety net: they cover 61.5% of agents' changed executable lines in Java and only 27.0% in Python, where 64.8% of PRs have no changed line executed by any existing test. Agent-written tests improve coverage over existing tests, but only in a minority of PRs: 35.9% of Java and 22.5% of Python Code + Tests PRs show a coverage gain. Across both languages, error-handling constructs (e.g., try and catch blocks) are the most consistently under-tested, with miss rates reaching 86.0% in Java and 81.0% in Python. These findings motivate coverage-aware development practices, coverage feedback loops for coding agents, and evaluation benchmarks that measure test quality to better help agents reliably test their own code.

  • 4 authors
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Jul 19

One note in three: a verified census of three deployed AI scribes, and the instrument that counted it

Ambient AI scribes draft clinical notes under the reassurance that a clinician signs every note. We audited three commercial AI scribes on the same 142 consultations: 565 notes from recorded UK primary-care and US ambulatory encounters plus authored scenarios. Twelve discovery passes proposed 13,678 candidate errors; the 5,898 clearing an importance filter went to an adversarial panel of two models from different families, each told to refute what it could, and 618 survived. One note in three (31.3% [27.0, 35.6]) carries a verified failure, concentrated in allergy and medication information, invented patient identity, and history written up as examination on telephone consultations that can contain none. No product was given a patient record; setting aside the two classes a record would have prefilled, invented identity and dates, the rate is 24.8% [20.8, 29.0]. One failure mode did not fit our scheme, drawn from published scribe-error taxonomies: a treatment the clinician retracts, recorded as delivered care. Two clinicians adjudicated blind, disjoint samples: a physician author upheld 20 of 21 findings (95.2% [77.3, 99.2]) and an independent clinician, not an author, 12 of 12 ([75.8, 100]); both judged every sampled refusal genuine. A failure rate depends on the instrument as much as the scribes. With model, evidence and settings fixed, the review instruction alone moves the share of candidates verified from 9.3% to 79.0%, and the reviewing family moves it too: alone at that instruction the gentler flags 54.8% of notes against 27.8%. Between 28% and 97% of sampled notes carry a failure depending on the standard. Published audits disagree among themselves by a margin instrument differences alone can produce: omission is 54-86% of their errors against our 23.1%. We release all 618 findings with transcript-side evidence, every prompt and model version, and the re-runnable pipeline.

  • 4 authors
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Aug 30

Program Synthesis with Large Language Models

This paper explores the limits of the current generation of large language models for program synthesis in general purpose programming languages. We evaluate a collection of such models (with between 244M and 137B parameters) on two new benchmarks, MBPP and MathQA-Python, in both the few-shot and fine-tuning regimes. Our benchmarks are designed to measure the ability of these models to synthesize short Python programs from natural language descriptions. The Mostly Basic Programming Problems (MBPP) dataset contains 974 programming tasks, designed to be solvable by entry-level programmers. The MathQA-Python dataset, a Python version of the MathQA benchmark, contains 23914 problems that evaluate the ability of the models to synthesize code from more complex text. On both datasets, we find that synthesis performance scales log-linearly with model size. Our largest models, even without finetuning on a code dataset, can synthesize solutions to 59.6 percent of the problems from MBPP using few-shot learning with a well-designed prompt. Fine-tuning on a held-out portion of the dataset improves performance by about 10 percentage points across most model sizes. On the MathQA-Python dataset, the largest fine-tuned model achieves 83.8 percent accuracy. Going further, we study the model's ability to engage in dialog about code, incorporating human feedback to improve its solutions. We find that natural language feedback from a human halves the error rate compared to the model's initial prediction. Additionally, we conduct an error analysis to shed light on where these models fall short and what types of programs are most difficult to generate. Finally, we explore the semantic grounding of these models by fine-tuning them to predict the results of program execution. We find that even our best models are generally unable to predict the output of a program given a specific input.

  • 11 authors
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Aug 15, 2021

Evaluating LLMs at Detecting Errors in LLM Responses

With Large Language Models (LLMs) being widely used across various tasks, detecting errors in their responses is increasingly crucial. However, little research has been conducted on error detection of LLM responses. Collecting error annotations on LLM responses is challenging due to the subjective nature of many NLP tasks, and thus previous research focuses on tasks of little practical value (e.g., word sorting) or limited error types (e.g., faithfulness in summarization). This work introduces ReaLMistake, the first error detection benchmark consisting of objective, realistic, and diverse errors made by LLMs. ReaLMistake contains three challenging and meaningful tasks that introduce objectively assessable errors in four categories (reasoning correctness, instruction-following, context-faithfulness, and parameterized knowledge), eliciting naturally observed and diverse errors in responses of GPT-4 and Llama 2 70B annotated by experts. We use ReaLMistake to evaluate error detectors based on 12 LLMs. Our findings show: 1) Top LLMs like GPT-4 and Claude 3 detect errors made by LLMs at very low recall, and all LLM-based error detectors perform much worse than humans. 2) Explanations by LLM-based error detectors lack reliability. 3) LLMs-based error detection is sensitive to small changes in prompts but remains challenging to improve. 4) Popular approaches to improving LLMs, including self-consistency and majority vote, do not improve the error detection performance. Our benchmark and code are provided at https://github.com/psunlpgroup/ReaLMistake.

  • 15 authors
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Apr 4, 2024

Climate Modelling in Low-Precision: Effects of both Deterministic & Stochastic Rounding

Motivated by recent advances in operational weather forecasting, we study the efficacy of low-precision arithmetic for climate simulations. We develop a framework to measure rounding error in a climate model which provides a stress-test for a low-precision version of the model, and we apply our method to a variety of models including the Lorenz system; a shallow water approximation for flow over a ridge; and a coarse resolution global atmospheric model with simplified parameterisations (SPEEDY). Although double precision (52 significant bits) is standard across operational climate models, in our experiments we find that single precision (23 sbits) is more than enough and that as low as half precision (10 sbits) is often sufficient. For example, SPEEDY can be run with 12 sbits across the entire code with negligible rounding error and this can be lowered to 10 sbits if very minor errors are accepted, amounting to less than 0.1 mm/6hr for the average grid-point precipitation, for example. Our test is based on the Wasserstein metric and this provides stringent non-parametric bounds on rounding error accounting for annual means as well as extreme weather events. In addition, by testing models using both round-to-nearest (RN) and stochastic rounding (SR) we find that SR can mitigate rounding error across a range of applications. Thus our results also provide evidence that SR could be relevant to next-generation climate models. While many studies have shown that low-precision arithmetic can be suitable on short-term weather forecasting timescales, our results give the first evidence that a similar low precision level can be suitable for climate.

  • 5 authors
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Apr 30, 2021

Converted, Not Equivalent: Benchmarking Codebase Conversion via Observational Equivalence

Coding agents increasingly act as codebase-scale collaborators that can assist with codebase conversion, but this progress has exposed a critical weakness: agents often over-trust their own local validation routines and declare success on artifacts that satisfy surface checks while violating the semantic contracts users actually care about. This problem is especially acute in codebase conversion, where prior evaluation is largely outcome-driven and therefore unstable: two implementations can match on a shallow outcome, such as a single forward loss, while diverging in gradients, optimizer behavior, or short-horizon training dynamics. We introduce T2J-Bench, a benchmark for codebase conversion that reformulates conversion as transfer under a fixed equivalence contract. A fixed verifier then compares source and converted codebases through three ordered stages: Spec (interface admissibility), Numeric (forward outputs, losses, gradients, and objective-specific tensors), and Behavioral (short training dynamics under fixed seeds). Across 355 blind conversion attempts, the best system reaches only 26.7--28.9% overall pass rate despite Spec pass rates up to 91.1%; a 4.7x token-budget spread yields only a 2.2x pass-rate spread; and all systems overestimate success by 66.6--97.8 points relative to the fixed evaluator. This suggests that failures stem more from contract-misaligned self-validation than from limited budget or backbone strength.

  • 8 authors
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Jun 2

Guiding Through Complexity: What Makes Good Supervision for Hard Reasoning Tasks?

How can "weak teacher models" such as average human annotators or existing AI systems, effectively supervise LLMs to improve performance on hard reasoning tasks, especially those that challenge and requires expertise or daily practice from the teacher models? In this paper, we seek for empirical answers to this question by investigating various data-driven strategies that offer supervision data at different quality levels upon tasks of varying complexity. Two intuitive strategies emerge for teacher models to provide supervision during alignment training: 1) using lower-quality supervision from complete tasks that match the difficulty of the target reasoning tasks, and 2) leveraging higher-quality supervision from easier subtasks that are less challenging. Interestingly, we find that even when the outcome error rate for hard task supervision is high (e.g., 90\%), training on such data can outperform perfectly correct supervision on easier subtasks on multiple hard math benchmarks. We further identify a more critical factor influencing training performance: step-wise error rates, which indicate the severity of errors in solutions. Specifically, training on hard task supervision with the same outcome error rates but disparate step-wise error rates can lead to a 30\% accuracy gap on MATH benchmark. Our results also reveal that supplementing hard task supervision with the corresponding subtask supervision can yield notable performance improvements than simply combining rephrased hard full task supervision, suggesting new avenues for data augmentation. Data and code are released at https://github.com/hexuan21/Weak-to-Strong.

  • 3 authors
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Oct 27, 2024

Fast and accurate AI-based pre-decoders for color codes

Color codes are promising alternatives to surface codes for universal fault-tolerant quantum computing due to their simpler lattice-surgery protocols and the transversal implementation of logical Clifford gates. However, their practical deployment has been limited by slower decoding algorithms and worse logical failure rates and thresholds compared to surface codes. Although AI-based logical-flip decoders have recently been proposed to address these challenges, no clear framework currently exists for implementing such decoders within the parallel block-wise decoding schemes in both space and time required for large-scale fault-tolerant computation. AI-based pre-decoders offer a scalable alternative due to their local nature. By performing spacelike corrections on physical qubits and timelike corrections on stabilizer measurements, pre-decoders are naturally compatible with parallel block-wise decoding schemes and lattice-surgery protocols. In this work, we introduce AI-based pre-decoders for triangular color codes. We present a novel neural-network architecture for their implementation and develop methods to simplify the complex training data generated by color-code syndrome-extraction circuits containing feedforward operations. Remarkably, we find that both logical failure rates (LERs) and runtimes improve relative to raw Chromobius decoding as the code distance increases. For example, at code distance d=31 and physical error rate p=0.3%, our pre-decoder + Chromobius pipeline improves the logical failure rate by a factor of 347x while reducing runtime by 7.33x compared to raw Chromobius decoding alone. These results demonstrate that AI-based pre-decoding can substantially narrow the performance gap between color codes and surface codes, bringing color codes closer to practical large-scale fault-tolerant quantum computation.

  • 4 authors
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Jul 10

AutoMedBench: Towards Medical AutoResearch with Agentic AI Models

Autonomous agents are increasingly expected to support end-to-end medical-AI research workflows, moving beyond isolated prediction tasks or short-form clinical question answering. However, existing medical agent benchmarks primarily evaluate final outputs, providing limited visibility into agent behavior within the research process. To address this gap, we present AutoMedBench, a workflow-aware benchmark for autonomous medical-AI research across diverse medical imaging and multimodal inference tasks, organizing agent execution into a unified five-stage workflow (S1-S5): Plan, Setup, Validate, Inference, and Submit. It comprises long-horizon tasks with each run averaging 33 agent turns, spanning five research tracks: segmentation, image enhancement, visual question answering (VQA), report generation, and lesion detection. Each task is evaluated under two difficulty tiers, Lite and Standard, which use the same data and metrics but differ in the amount of task-brief scaffolding, and each run is scored using both final task performance and S1-S5 stage scores, enabling stage-level analysis from the initial task brief to the final submitted artifact. Across thousands of recorded runs, stage-level scoring reveals that Validate is the weakest workflow stage on average, whereas Setup is the strongest, suggesting that current agents are better at making pipelines executable than at verifying their reliability. Post-run error analysis further shows that verification and submission failures dominate tagged errors, accounting for 37.7% and 38.1% of fired codes respectively, whereas task-understanding errors are rare at 0.9%, and runs with one fired error code have a 48% lower overall score than runs with no error code on average.

What Single-Prompt Accuracy Misses: A Multi-Variant Reliability Audit of Language Models

Single-prompt accuracy is the dominant way to benchmark language models, but it can miss reliability failures that matter. We evaluate a 15-model open-weight corpus, with the main reliability analyses focused on 10 instruct models across five classification and reasoning benchmarks under five prompt variants each, measuring accuracy, token-probability calibration, verbal-confidence calibration, verbal parse rate, and prompt-perturbation spread for every (model x dataset x variant) cell. We find three broad results. First, evaluation design can materially change the conclusion. Switching Expected Calibration Error (ECE) token from a raw to a label-set-normalised definition changes per-cell calibration by a mean absolute 0.149. More strikingly, pairing a chain-of-thought prompt with a first-character evaluator on ARC-Challenge reduces apparent accuracy by 72-88% across all five primary models; two independent repair procedures recover 93.8% and 102.7% of the lost performance, indicating an evaluator-side rather than model-side failure. Second, confidence signals are fragile. On MMLU-Pro, every primary model verbally reports confidence substantially above both its accuracy and its token-probability confidence on the same rows, and verbal parse rate can collapse for a single model on a single prompt variant. Third, prompt robustness does not track parameter count reliably. Across 10 instruct models, the correlation between model size and prompt-perturbation spread ranges from -0.244 to 0.474 across benchmarks. Taken together, these results show that reliability conclusions for small language models depend not only on the model being evaluated, but also on the evaluation pipeline used to measure it. We argue that calibration definitions, evaluator logic, verbal parseability, and prompt robustness should be reported explicitly when making reliability claims.

  • 2 authors
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May 2